BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B01LP1|AL427253
(701 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 522 e-148
>3x_Contig1619
Length = 7770
Score = 522 bits (247), Expect = e-148
Identities = 250/253 (98%)
Strand = Plus / Minus
Query: 1 taatataattaaatatatttctcattcttatagaatatttagagaaggggtaattatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4959 taatataattaaatatatttctcattcttatagaatatttagagaaggggtaattatata 4900
Query: 61 ttttttcccccgcggtatcatcttaccggatggttgggtgataccgcggggcttataata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4899 ttttttcccccgcggtatcatcttaccggatggttgggtgataccgcggggcttataata 4840
Query: 121 tatagtatatatattatagtataatgggaaattataagtaaattaggaaaaactatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4839 tatagtatatatattatagtataatgggaaattataagtaaattaggaaaaactatttat 4780
Query: 181 agtccccgcggatatatcccgataatatcgggatatatccgcggggttaatatatatatr 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4779 agtccccgcggatatatcccgataatatcgggatatatccgcggggttaatatatatata 4720
Query: 241 tkakatatatatt 253
| | |||||||||
Sbjct: 4719 ttatatatatatt 4707
Score = 220 bits (104), Expect = 3e-57
Identities = 116/122 (95%)
Strand = Plus / Minus
Query: 580 catagaaactataawwmaatcggttagaatagtattttgataaggtaccaatataggttc 639
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4382 catagaaactataattcaatcggttagaatagtattttgataaggtaccaatataggttc 4323
Query: 640 aattcctattagtttcatatataaataaatggatagttgactgagtggtttaaggtgtaa 699
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 4322 aattcctattagtttcatatatatttaaatggatggttgactgagtggtttaaggtgtaa 4263
Query: 700 ta 701
||
Sbjct: 4262 ta 4261
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.722 1.38
Gapped
Lambda K H
1.47 0.722 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4160
Number of Sequences: 1807
Number of extensions: 4160
Number of successful extensions: 131
Number of sequences better than 1.0e-20: 1
length of query: 701
length of database: 10,358,551
effective HSP length: 15
effective length of query: 686
effective length of database: 10,331,446
effective search space: 7087371956
effective search space used: 7087371956
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.6 bits)
S1: 11 (23.7 bits)
S2: 47 (99.8 bits)